Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901899.1_cds_XP_016451945.1_46240
CDS Infomation

[gene=LOC107776540] [db_xref=GeneID:107776540] [protein=importin-5-like isoform X2] [protein_id=XP_016451945.1] [location=join(105254..106459,106968..107186,117683..117757,117839..117990,123318..123456,123548..123617,123855..123943,124053..124109,124714..124992,125084..125169,125241..125307,125396..125462,125565..125701,133329..133487)] [gbkey=CDS]
Sequence

ATGAATATTAGCGAGTTGACTCAGTTCCAGAAGGCCCAGATGAAGGCGATTCTTGGGCCT
GACTCTAGTGTTCCTTTTGAAACCTTTATCTCGGATCTCATGGCGAGCTCCTCTGAGGCT
GAGTCAATGTTGGACATGATCAAGCAGGAGGATTCGAACTTGCTTGCTGTTAAGCTTGCT
AACCTTCTAGACTCTCCCCATATCACTGATGATTCACGCGCTACGTGTGCTATCGTCCTC
CAAAATTTGTTTGTTGGGGATGATGGATATGGTTGGCGCAATCTAAGTCTATCGACTCGG
TCCGGTGTGCAATGTATCCTTCTGAACCGTATCAAGATTGAAGAATCAAAATCCATTATG
CAGACCCTTTACATTACGCTTTGTGTAAGCCTCCAAGATAACAAGGAGTCTGAAATATGT
AGCTTGTTCGGCCAATATTATGACAACTCCAGTTATATCAAGGTAGTAGAGTTTACTTTG
TCATTAGTTTCCCAGTGCGCCAAACAAGGAGATGATTTATCATCAGCCCCTTGGATCAAG
GATATGTTACTAGGTGCACTGAATGGTTGCAGTGATATGAGATTGAGGATGGCGGCACTG
AGGGCAGCGATCGACATCATTCAGTGCCTCTCTAGTTCAAATGATAAAGACTGGTATCAG
GGTTTGTTGCCAGCTTTGTTGGGGACCTTGACAGAAGCATTGAGCAAAGGTGAGGAGGTT
ACTGCCAGGGAAGCGCTGGAACATTTTGTTGAGTTTGCTGAGAATGAACCTAGGTTCTTA
AGGATGCAACTAGTAGAAGTGGTGGCTACCATGTTTGAGATAGCAGAGAATGTGAGTTTG
GAAAAGGAGACGAGGCACTTGGCGATTAAGTTCCTGATAACTTTAGTTGAGGCGAAAAAG
GAAGCTCCCGGCATGATGAAGAAATTACCATTATTTACTAGCAACTGTTTTGCTATGTTA
TTGAAGTTGTTACAAGATGTTGAGGACGAACCACCTTGGAACAATATCCACAAGGTTGCA
TTTAGGGAATATGGTAACATTATGGTTGGGATCTGCTATTTTGATCGCTTGTCTCGTGCA
TTAGGTGCTAAGACTATTGCTCCTGTTGCTAAAGAGCAGCTCTCTGCTTGCTTGGCTGCC
CCTGACTGGGAGAAACGCCATGCAACACTTCTTGCACTTGCTGTTATTTCTGAATGTTGC
CCGAAGGTGATGCTTACGAGTATGGAGGAACTGGTTCTGAATTATTTCCTGAACATGGTT
CTGGATTGTTTCCAAGATCCTCACCCTCGAGTAAGATGGGCCGCTATTAGGGCAATTGCC
TTGTTTTCGACCTTCTTCTGTCCACAGTTGCAAGAACAATTCCATGATCAAGTATTACCT
GCATTAGCTGCAGCTATGGCTGATTTTCAAAATCCAATAATACAGGTAATGGAAGTTCTT
CTGTCATTACTAGGATCACAACTGAAGGCGGACGATCGCAGTAATGTTTATCTATTCTTG
GCAGGAGCCAGAATTTTCTTATGCATGGGGAAGGAATTTCTTCCTTACATGAGGGTAGCC
ATCCCTTTTATGATTCAACTTGCTCAAGTTGAACTTGATATAACCATCTATGATCATTCA
TACTCTGGATTATATGGATTAGATTACGATAGGGACATTATAGTCAAGTTTGAGGAAACA
AGCATGTGCATCAAAGATAATATCCGACTAGAGGAGAAATCTATAGCCTGTCATCTCCTT
GACATCATTTCTGTCTTGCTGGAGGAAGATTTCTACCCTTGGATTTCCCAGGCTGCTCCA
GTCTTAGAACCACTTTTGAAATTCTACATCCACGACGATGTCAGGGAAAATGCTATTTTT
GAGAAAGGGACTGCTCAAGGTGGAAACAAGTGGTACTTCAAGGAGTTGTCTGGCCGTATA
ATATTGGCTTTGGGGGACGCAATATATTCGGAGCATGAGACAAAACTATGTGAAATTATA
TTGAAGGAATTGAATCAATGCCTAAAGATAAGTGGACCACATCTTGATGAAGATCAGGTT
CGTAGAATCATGAATGGGATAAAGCACGTCATTACAGAAAGTTCATGCAGAAAAGGAAAA
CTCACAGAGAGAGAAAAATCAGATGACTTTGATGCTGAGGAAGCTGAATTGCTCAGGGAG
GAAAGAGAGCTAGAAGAAAAAGTATTTTCTAGGGTTGGTTGCATATTGTTGACATTGATC
AAAACCTTCAAGGCTGCTTTCTTGCCTTTCCTTAATGAGCTTTCCTCATATTTAATGCCT
ATGACAGGCAAGGATAAAACAGCTAAAGAGAGAAGTGCATGTGTAAATATCTTTAATAAA
CTTGTGGAGGAATGCAGCGAATCATCTCTAAAGTATTATAACATATGTCTTCCTTTTATT
TTGGACTCAAGCAATGACGAAAATCCAGTTCTTAGAGAGAATGCATTTTATGGACTTGGG
CTTTGTGCGGAATATGGTGGTTTAGTTTTCAAACCATTTATCGGAGAGGCTCTTTCAAGG
ATCAATGTTGTGATAACACATCTACATGCTCTTGCACCTGAGAATGAACAGGCATATCAT
GATGCTGTTTTTGCACTTGGTCAGATATGTCAGTTTCATCGGGAAAGTATTGACTCCACG
CAGATTATTCCGGCTTGGTTGAATTGTCTGCCTATAAGAGGTAACATGGTTGTTCACGAC
CAGCTCTGTTCAATGGTTGAAAGGTACTGTACTGGACTAATCTGCTCTAGTTTCTATCAT
CATCTGGTCTTTACTTTACTTTTCAGATTTTCTTTTTGTTAA

Peptide Sequence

PEP ID

XP_016451945.1
PEP Infomation

PREDICTED: importin-5-like isoform X2 [Nicotiana tabacum]
Sequence

MNISELTQFQKAQMKAILGPDSSVPFETFISDLMASSSEAESMLDMIKQEDSNLLAVKLA
NLLDSPHITDDSRATCAIVLQNLFVGDDGYGWRNLSLSTRSGVQCILLNRIKIEESKSIM
QTLYITLCVSLQDNKESEICSLFGQYYDNSSYIKVVEFTLSLVSQCAKQGDDLSSAPWIK
DMLLGALNGCSDMRLRMAALRAAIDIIQCLSSSNDKDWYQGLLPALLGTLTEALSKGEEV
TAREALEHFVEFAENEPRFLRMQLVEVVATMFEIAENVSLEKETRHLAIKFLITLVEAKK
EAPGMMKKLPLFTSNCFAMLLKLLQDVEDEPPWNNIHKVAFREYGNIMVGICYFDRLSRA
LGAKTIAPVAKEQLSACLAAPDWEKRHATLLALAVISECCPKVMLTSMEELVLNYFLNMV
LDCFQDPHPRVRWAAIRAIALFSTFFCPQLQEQFHDQVLPALAAAMADFQNPIIQVMEVL
LSLLGSQLKADDRSNVYLFLAGARIFLCMGKEFLPYMRVAIPFMIQLAQVELDITIYDHS
YSGLYGLDYDRDIIVKFEETSMCIKDNIRLEEKSIACHLLDIISVLLEEDFYPWISQAAP
VLEPLLKFYIHDDVRENAIFEKGTAQGGNKWYFKELSGRIILALGDAIYSEHETKLCEII
LKELNQCLKISGPHLDEDQVRRIMNGIKHVITESSCRKGKLTEREKSDDFDAEEAELLRE
ERELEEKVFSRVGCILLTLIKTFKAAFLPFLNELSSYLMPMTGKDKTAKERSACVNIFNK
LVEECSESSLKYYNICLPFILDSSNDENPVLRENAFYGLGLCAEYGGLVFKPFIGEALSR
INVVITHLHALAPENEQAYHDAVFALGQICQFHRESIDSTQIIPAWLNCLPIRGNMVVHD
QLCSMVERYCTGLICSSFYHHLVFTLLFRFSFC

Transcript Sequence

Gene sequence data has not been registered.